Comparative phylogeography of African rain forest trees: A review of genetic signatures of vegetation history in the Guineo-Congolian region
Identifieur interne : 005045 ( Main/Exploration ); précédent : 005044; suivant : 005046Comparative phylogeography of African rain forest trees: A review of genetic signatures of vegetation history in the Guineo-Congolian region
Auteurs : Olivier J. Hardy [Belgique] ; Céline Born [France] ; Katarina Budde [Espagne] ; Kasso Daïnou [Belgique] ; Gilles Dauby [Belgique] ; Jérôme Duminil [Belgique, Cameroun] ; Eben-Ezer B. K. Ewedje [Belgique] ; Céline Gomez [France] ; Myriam Heuertz [Belgique, Espagne] ; Guillaume K. Koffi [Belgique, Côte d'Ivoire] ; Andrew J. Lowe [Australie] ; Claire Micheneau [Belgique, Australie] ; Dyana Ndiade-Bourobou [Gabon] ; Rosalía Pineiro [Belgique] ; Valérie Poncet [France]Source :
- Comptes rendus. Géoscience [ 1631-0713 ] ; 2013.
Descripteurs français
- Pascal (Inist)
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English descriptors
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Abstract
The biogeographic history of the African rain forests has been contentious. Phylogeography, the study of the geographic distribution of genetic lineages within species, can highlight the signatures of historical events affecting the demography and distribution of species (i.e. population fragmentation or size changes, range expansion/contraction) and, thereby, the ecosystems they belong to. The accumulation of recent data for African rain forests now enables a first biogeographic synthesis for the region. In this review, we explain which phylogeographic patterns are expected under different scenarios of past demographic change, and we give an overview of the patterns detected in African rain forest trees to discuss whether they support alternative hypotheses regarding the history of the African rain forest cover. The major genetic discontinuities in the region support the role of refugia during climatic oscillations, though not necessarily following the classically proposed scenarios. We identify in particular a genetic split between the North and the South of the Lower Guinean region. Finally we provide some perspectives for future study.
Affiliations:
- Australie, Belgique, Cameroun, Côte d'Ivoire, Espagne, France, Gabon
- Communauté de Madrid, Languedoc-Roussillon, Occitanie (région administrative), Province de Liège, Région wallonne, Vienne (Autriche)
- Bruxelles, Liège, Montpellier, Vienne (Autriche)
- Université de Liège, Université libre de Bruxelles
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Hardy</name><affiliation wicri:level="4"><inist:fA14 i1="01"><s1>Evolutionary Biology and Ecology - CP 160/12, faculté des sciences, université Libre de Bruxelles, 50, avenue Frankin-Delano-Roosevelt</s1><s2>1050 Brussels</s2><s3>BEL</s3><sZ>1 aut.</sZ><sZ>5 aut.</sZ><sZ>6 aut.</sZ><sZ>7 aut.</sZ><sZ>9 aut.</sZ><sZ>10 aut.</sZ><sZ>12 aut.</sZ><sZ>14 aut.</sZ></inist:fA14><country>Belgique</country><placeName><region type="land" nuts="2">Vienne (Autriche)</region><settlement type="city">Vienne (Autriche)</settlement><settlement type="city">Bruxelles</settlement></placeName><orgName type="university">Université libre de Bruxelles</orgName></affiliation></author><author><name sortKey="Born, Celine" sort="Born, Celine" uniqKey="Born C" first="Céline" last="Born">Céline Born</name><affiliation wicri:level="1"><inist:fA14 i1="02"><s1>Centre d'écologie fonctionnelle et évolutive, Centre national de la recherche scientifique (CEFE-CNRS), 1919, route de Mende</s1><s2>34293 Montpellier</s2><s3>FRA</s3><sZ>2 aut.</sZ></inist:fA14><country>France</country><wicri:noRegion>34293 Montpellier</wicri:noRegion><placeName><settlement type="city">Montpellier</settlement><region type="region" nuts="2">Occitanie (région administrative)</region><region type="old region" nuts="2">Languedoc-Roussillon</region></placeName></affiliation></author><author><name sortKey="Budde, Katarina" sort="Budde, Katarina" uniqKey="Budde K" first="Katarina" last="Budde">Katarina Budde</name><affiliation wicri:level="2"><inist:fA14 i1="03"><s1>INIA, Forest Research Centre, ctra. A Coruña km 7.5</s1><s2>28250 Madrid</s2><s3>ESP</s3><sZ>3 aut.</sZ><sZ>9 aut.</sZ></inist:fA14><country>Espagne</country><placeName><region nuts="2" type="communauté">Communauté de Madrid</region></placeName></affiliation></author><author><name sortKey="Dainou, Kasso" sort="Dainou, Kasso" uniqKey="Dainou K" first="Kasso" last="Daïnou">Kasso Daïnou</name><affiliation wicri:level="4"><inist:fA14 i1="04"><s1>Laboratoire de foresterie des regions tropicales et subtropicales, unité de gestion des ressources forestières et milieux naturels, GxABT, université de Liege</s1><s2>Liege</s2><s3>BEL</s3><sZ>4 aut.</sZ></inist:fA14><country>Belgique</country><placeName><settlement type="city">Liège</settlement><region type="region" nuts="1">Région wallonne</region><region type="province" nuts="1">Province de Liège</region></placeName><orgName type="university">Université de Liège</orgName></affiliation></author><author><name sortKey="Dauby, Gilles" sort="Dauby, Gilles" uniqKey="Dauby G" first="Gilles" last="Dauby">Gilles Dauby</name><affiliation wicri:level="4"><inist:fA14 i1="01"><s1>Evolutionary Biology and Ecology - CP 160/12, faculté des sciences, université Libre de Bruxelles, 50, avenue Frankin-Delano-Roosevelt</s1><s2>1050 Brussels</s2><s3>BEL</s3><sZ>1 aut.</sZ><sZ>5 aut.</sZ><sZ>6 aut.</sZ><sZ>7 aut.</sZ><sZ>9 aut.</sZ><sZ>10 aut.</sZ><sZ>12 aut.</sZ><sZ>14 aut.</sZ></inist:fA14><country>Belgique</country><placeName><region type="land" nuts="2">Vienne (Autriche)</region><settlement type="city">Vienne (Autriche)</settlement><settlement type="city">Bruxelles</settlement></placeName><orgName type="university">Université libre de Bruxelles</orgName></affiliation></author><author><name sortKey="Duminil, Jerome" sort="Duminil, Jerome" uniqKey="Duminil J" first="Jérôme" last="Duminil">Jérôme Duminil</name><affiliation wicri:level="4"><inist:fA14 i1="01"><s1>Evolutionary Biology and Ecology - CP 160/12, faculté des sciences, université Libre de Bruxelles, 50, avenue Frankin-Delano-Roosevelt</s1><s2>1050 Brussels</s2><s3>BEL</s3><sZ>1 aut.</sZ><sZ>5 aut.</sZ><sZ>6 aut.</sZ><sZ>7 aut.</sZ><sZ>9 aut.</sZ><sZ>10 aut.</sZ><sZ>12 aut.</sZ><sZ>14 aut.</sZ></inist:fA14><country>Belgique</country><placeName><region type="land" nuts="2">Vienne (Autriche)</region><settlement type="city">Vienne (Autriche)</settlement><settlement type="city">Bruxelles</settlement></placeName><orgName type="university">Université libre de Bruxelles</orgName></affiliation><affiliation wicri:level="1"><inist:fA14 i1="11"><s1>Biodiversity international, Forest Genetic Resources Programme, Sub-Regional Office for Africa, P.O. Box 2008</s1><s2>Messa, Yaoundé</s2><s3>CMR</s3><sZ>6 aut.</sZ></inist:fA14><country>Cameroun</country><wicri:noRegion>Messa, Yaoundé</wicri:noRegion></affiliation></author><author><name sortKey="Ewedje, Eben Ezer B K" sort="Ewedje, Eben Ezer B K" uniqKey="Ewedje E" first="Eben-Ezer B. K." last="Ewedje">Eben-Ezer B. K. Ewedje</name><affiliation wicri:level="4"><inist:fA14 i1="01"><s1>Evolutionary Biology and Ecology - CP 160/12, faculté des sciences, université Libre de Bruxelles, 50, avenue Frankin-Delano-Roosevelt</s1><s2>1050 Brussels</s2><s3>BEL</s3><sZ>1 aut.</sZ><sZ>5 aut.</sZ><sZ>6 aut.</sZ><sZ>7 aut.</sZ><sZ>9 aut.</sZ><sZ>10 aut.</sZ><sZ>12 aut.</sZ><sZ>14 aut.</sZ></inist:fA14><country>Belgique</country><placeName><region type="land" nuts="2">Vienne (Autriche)</region><settlement type="city">Vienne (Autriche)</settlement><settlement type="city">Bruxelles</settlement></placeName><orgName type="university">Université libre de Bruxelles</orgName></affiliation></author><author><name sortKey="Gomez, Celine" sort="Gomez, Celine" uniqKey="Gomez C" first="Céline" last="Gomez">Céline Gomez</name><affiliation wicri:level="1"><inist:fA14 i1="05"><s1>Institut de recherche pour le développement (IRD), UMR DIADE, BP 64501</s1><s2>34394 Montpellier</s2><s3>FRA</s3><sZ>8 aut.</sZ><sZ>15 aut.</sZ></inist:fA14><country>France</country><wicri:noRegion>34394 Montpellier</wicri:noRegion><placeName><settlement type="city">Montpellier</settlement><region type="region" nuts="2">Occitanie (région administrative)</region><region type="old region" nuts="2">Languedoc-Roussillon</region></placeName></affiliation></author><author><name sortKey="Heuertz, Myriam" sort="Heuertz, Myriam" uniqKey="Heuertz M" first="Myriam" last="Heuertz">Myriam Heuertz</name><affiliation wicri:level="4"><inist:fA14 i1="01"><s1>Evolutionary Biology and Ecology - CP 160/12, faculté des sciences, université Libre de Bruxelles, 50, avenue Frankin-Delano-Roosevelt</s1><s2>1050 Brussels</s2><s3>BEL</s3><sZ>1 aut.</sZ><sZ>5 aut.</sZ><sZ>6 aut.</sZ><sZ>7 aut.</sZ><sZ>9 aut.</sZ><sZ>10 aut.</sZ><sZ>12 aut.</sZ><sZ>14 aut.</sZ></inist:fA14><country>Belgique</country><placeName><region type="land" nuts="2">Vienne (Autriche)</region><settlement type="city">Vienne (Autriche)</settlement><settlement type="city">Bruxelles</settlement></placeName><orgName type="university">Université libre de Bruxelles</orgName></affiliation><affiliation wicri:level="2"><inist:fA14 i1="03"><s1>INIA, Forest Research Centre, ctra. A Coruña km 7.5</s1><s2>28250 Madrid</s2><s3>ESP</s3><sZ>3 aut.</sZ><sZ>9 aut.</sZ></inist:fA14><country>Espagne</country><placeName><region nuts="2" type="communauté">Communauté de Madrid</region></placeName></affiliation></author><author><name sortKey="Koffi, Guillaume K" sort="Koffi, Guillaume K" uniqKey="Koffi G" first="Guillaume K." last="Koffi">Guillaume K. Koffi</name><affiliation wicri:level="4"><inist:fA14 i1="01"><s1>Evolutionary Biology and Ecology - CP 160/12, faculté des sciences, université Libre de Bruxelles, 50, avenue Frankin-Delano-Roosevelt</s1><s2>1050 Brussels</s2><s3>BEL</s3><sZ>1 aut.</sZ><sZ>5 aut.</sZ><sZ>6 aut.</sZ><sZ>7 aut.</sZ><sZ>9 aut.</sZ><sZ>10 aut.</sZ><sZ>12 aut.</sZ><sZ>14 aut.</sZ></inist:fA14><country>Belgique</country><placeName><region type="land" nuts="2">Vienne (Autriche)</region><settlement type="city">Vienne (Autriche)</settlement><settlement type="city">Bruxelles</settlement></placeName><orgName type="university">Université libre de Bruxelles</orgName></affiliation><affiliation wicri:level="1"><inist:fA14 i1="06"><s1>Université d'Abobo-Adjamé, laboratoire de biologie et amélioration des productions végétales, 02 BP 801</s1><s2>Abidjan 02</s2><s3>CIV</s3><sZ>10 aut.</sZ></inist:fA14><country>Côte d'Ivoire</country><wicri:noRegion>Abidjan 02</wicri:noRegion></affiliation></author><author><name sortKey="Lowe, Andrew J" sort="Lowe, Andrew J" uniqKey="Lowe A" first="Andrew J." last="Lowe">Andrew J. Lowe</name><affiliation wicri:level="1"><inist:fA14 i1="07"><s1>Australian Centre for Evolutionary Biology and Biodiversity, School of Earth and Environmental Science and Environment Institute, University of Adelaide, North Terrace</s1><s2>Adelaide, SA 5001</s2><s3>AUS</s3><sZ>11 aut.</sZ></inist:fA14><country>Australie</country><wicri:noRegion>Adelaide, SA 5001</wicri:noRegion></affiliation><affiliation wicri:level="1"><inist:fA14 i1="08"><s1>The Science Resource Centre, Department of Environment and Natural Resources</s1><s2>Adelaide, SA 5005</s2><s3>AUS</s3><sZ>11 aut.</sZ></inist:fA14><country>Australie</country><wicri:noRegion>Adelaide, SA 5005</wicri:noRegion></affiliation></author><author><name sortKey="Micheneau, Claire" sort="Micheneau, Claire" uniqKey="Micheneau C" first="Claire" last="Micheneau">Claire Micheneau</name><affiliation wicri:level="4"><inist:fA14 i1="01"><s1>Evolutionary Biology and Ecology - CP 160/12, faculté des sciences, université Libre de Bruxelles, 50, avenue Frankin-Delano-Roosevelt</s1><s2>1050 Brussels</s2><s3>BEL</s3><sZ>1 aut.</sZ><sZ>5 aut.</sZ><sZ>6 aut.</sZ><sZ>7 aut.</sZ><sZ>9 aut.</sZ><sZ>10 aut.</sZ><sZ>12 aut.</sZ><sZ>14 aut.</sZ></inist:fA14><country>Belgique</country><placeName><region type="land" nuts="2">Vienne (Autriche)</region><settlement type="city">Vienne (Autriche)</settlement><settlement type="city">Bruxelles</settlement></placeName><orgName type="university">Université libre de Bruxelles</orgName></affiliation><affiliation wicri:level="1"><inist:fA14 i1="09"><s1>Australian Tropical Herbarium, James Cook University, PO Box 6811</s1><s2>Cairns QLD 4870, Cairns</s2><s3>AUS</s3><sZ>12 aut.</sZ></inist:fA14><country>Australie</country><wicri:noRegion>Cairns QLD 4870, Cairns</wicri:noRegion></affiliation></author><author><name sortKey="Ndiade Bourobou, Dyana" sort="Ndiade Bourobou, Dyana" uniqKey="Ndiade Bourobou D" first="Dyana" last="Ndiade-Bourobou">Dyana Ndiade-Bourobou</name><affiliation wicri:level="1"><inist:fA14 i1="10"><s1>CENAREST, Institut de recherches agronomiques et forestières, BP 842 Gros-Bouquet</s1><s2>Libreville</s2><s3>GAB</s3><sZ>13 aut.</sZ></inist:fA14><country>Gabon</country><wicri:noRegion>Libreville</wicri:noRegion></affiliation></author><author><name sortKey="Pineiro, Rosalia" sort="Pineiro, Rosalia" uniqKey="Pineiro R" first="Rosalía" last="Pineiro">Rosalía Pineiro</name><affiliation wicri:level="4"><inist:fA14 i1="01"><s1>Evolutionary Biology and Ecology - CP 160/12, faculté des sciences, université Libre de Bruxelles, 50, avenue Frankin-Delano-Roosevelt</s1><s2>1050 Brussels</s2><s3>BEL</s3><sZ>1 aut.</sZ><sZ>5 aut.</sZ><sZ>6 aut.</sZ><sZ>7 aut.</sZ><sZ>9 aut.</sZ><sZ>10 aut.</sZ><sZ>12 aut.</sZ><sZ>14 aut.</sZ></inist:fA14><country>Belgique</country><placeName><region type="land" nuts="2">Vienne (Autriche)</region><settlement type="city">Vienne (Autriche)</settlement><settlement type="city">Bruxelles</settlement></placeName><orgName type="university">Université libre de Bruxelles</orgName></affiliation></author><author><name sortKey="Poncet, Valerie" sort="Poncet, Valerie" uniqKey="Poncet V" first="Valérie" last="Poncet">Valérie Poncet</name><affiliation wicri:level="1"><inist:fA14 i1="05"><s1>Institut de recherche pour le développement (IRD), UMR DIADE, BP 64501</s1><s2>34394 Montpellier</s2><s3>FRA</s3><sZ>8 aut.</sZ><sZ>15 aut.</sZ></inist:fA14><country>France</country><wicri:noRegion>34394 Montpellier</wicri:noRegion><placeName><settlement type="city">Montpellier</settlement><region type="region" nuts="2">Occitanie (région administrative)</region><region type="old region" nuts="2">Languedoc-Roussillon</region></placeName></affiliation></author></analytic><series><title level="j" type="main">Comptes rendus. Géoscience</title><title level="j" type="abbreviated">C. r., Géosci.</title><idno type="ISSN">1631-0713</idno><imprint><date when="2013">2013</date></imprint></series></biblStruct></sourceDesc><seriesStmt><title level="j" type="main">Comptes rendus. Géoscience</title><title level="j" type="abbreviated">C. r., Géosci.</title><idno type="ISSN">1631-0713</idno></seriesStmt></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Congo</term><term>Guinea</term><term>accumulation</term><term>communities</term><term>contraction</term><term>discontinuities</term><term>ecosystems</term><term>expansion</term><term>forests</term><term>fragmentation</term><term>oscillations</term><term>phylogeny</term><term>trees</term><term>vegetation</term></keywords><keywords scheme="Pascal" xml:lang="fr"><term>Forêt</term><term>Arbre</term><term>Végétation</term><term>Population</term><term>Fragmentation</term><term>Expansion</term><term>Contraction</term><term>Ecosystème</term><term>Accumulation</term><term>Discontinuité</term><term>Oscillation</term><term>Phylogénie</term><term>Phylogéographie</term><term>Forêt ombrophile</term><term>Génétique</term><term>Guinée</term><term>Congo</term></keywords><keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Guinée</term></keywords><keywords scheme="Wicri" type="topic" xml:lang="fr"><term>Forêt</term><term>Arbre</term><term>Génétique</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The biogeographic history of the African rain forests has been contentious. Phylogeography, the study of the geographic distribution of genetic lineages within species, can highlight the signatures of historical events affecting the demography and distribution of species (i.e. population fragmentation or size changes, range expansion/contraction) and, thereby, the ecosystems they belong to. The accumulation of recent data for African rain forests now enables a first biogeographic synthesis for the region. In this review, we explain which phylogeographic patterns are expected under different scenarios of past demographic change, and we give an overview of the patterns detected in African rain forest trees to discuss whether they support alternative hypotheses regarding the history of the African rain forest cover. The major genetic discontinuities in the region support the role of refugia during climatic oscillations, though not necessarily following the classically proposed scenarios. We identify in particular a genetic split between the North and the South of the Lower Guinean region. Finally we provide some perspectives for future study.</div></front></TEI><affiliations><list><country><li>Australie</li><li>Belgique</li><li>Cameroun</li><li>Côte d'Ivoire</li><li>Espagne</li><li>France</li><li>Gabon</li></country><region><li>Communauté de Madrid</li><li>Languedoc-Roussillon</li><li>Occitanie (région administrative)</li><li>Province de Liège</li><li>Région wallonne</li><li>Vienne (Autriche)</li></region><settlement><li>Bruxelles</li><li>Liège</li><li>Montpellier</li><li>Vienne (Autriche)</li></settlement><orgName><li>Université de Liège</li><li>Université libre de Bruxelles</li></orgName></list><tree><country name="Belgique"><region name="Vienne (Autriche)"><name sortKey="Hardy, Olivier J" sort="Hardy, Olivier J" uniqKey="Hardy O" first="Olivier J." last="Hardy">Olivier J. Hardy</name></region><name sortKey="Dainou, Kasso" sort="Dainou, Kasso" uniqKey="Dainou K" first="Kasso" last="Daïnou">Kasso Daïnou</name><name sortKey="Dauby, Gilles" sort="Dauby, Gilles" uniqKey="Dauby G" first="Gilles" last="Dauby">Gilles Dauby</name><name sortKey="Duminil, Jerome" sort="Duminil, Jerome" uniqKey="Duminil J" first="Jérôme" last="Duminil">Jérôme Duminil</name><name sortKey="Ewedje, Eben Ezer B K" sort="Ewedje, Eben Ezer B K" uniqKey="Ewedje E" first="Eben-Ezer B. K." last="Ewedje">Eben-Ezer B. K. Ewedje</name><name sortKey="Heuertz, Myriam" sort="Heuertz, Myriam" uniqKey="Heuertz M" first="Myriam" last="Heuertz">Myriam Heuertz</name><name sortKey="Koffi, Guillaume K" sort="Koffi, Guillaume K" uniqKey="Koffi G" first="Guillaume K." last="Koffi">Guillaume K. Koffi</name><name sortKey="Micheneau, Claire" sort="Micheneau, Claire" uniqKey="Micheneau C" first="Claire" last="Micheneau">Claire Micheneau</name><name sortKey="Pineiro, Rosalia" sort="Pineiro, Rosalia" uniqKey="Pineiro R" first="Rosalía" last="Pineiro">Rosalía Pineiro</name></country><country name="France"><region name="Occitanie (région administrative)"><name sortKey="Born, Celine" sort="Born, Celine" uniqKey="Born C" first="Céline" last="Born">Céline Born</name></region><name sortKey="Gomez, Celine" sort="Gomez, Celine" uniqKey="Gomez C" first="Céline" last="Gomez">Céline Gomez</name><name sortKey="Poncet, Valerie" sort="Poncet, Valerie" uniqKey="Poncet V" first="Valérie" last="Poncet">Valérie Poncet</name></country><country name="Espagne"><region name="Communauté de Madrid"><name sortKey="Budde, Katarina" sort="Budde, Katarina" uniqKey="Budde K" first="Katarina" last="Budde">Katarina Budde</name></region><name sortKey="Heuertz, Myriam" sort="Heuertz, Myriam" uniqKey="Heuertz M" first="Myriam" last="Heuertz">Myriam Heuertz</name></country><country name="Cameroun"><noRegion><name sortKey="Duminil, Jerome" sort="Duminil, Jerome" uniqKey="Duminil J" first="Jérôme" last="Duminil">Jérôme Duminil</name></noRegion></country><country name="Côte d'Ivoire"><noRegion><name sortKey="Koffi, Guillaume K" sort="Koffi, Guillaume K" uniqKey="Koffi G" first="Guillaume K." last="Koffi">Guillaume K. Koffi</name></noRegion></country><country name="Australie"><noRegion><name sortKey="Lowe, Andrew J" sort="Lowe, Andrew J" uniqKey="Lowe A" first="Andrew J." last="Lowe">Andrew J. Lowe</name></noRegion><name sortKey="Lowe, Andrew J" sort="Lowe, Andrew J" uniqKey="Lowe A" first="Andrew J." last="Lowe">Andrew J. Lowe</name><name sortKey="Micheneau, Claire" sort="Micheneau, Claire" uniqKey="Micheneau C" first="Claire" last="Micheneau">Claire Micheneau</name></country><country name="Gabon"><noRegion><name sortKey="Ndiade Bourobou, Dyana" sort="Ndiade Bourobou, Dyana" uniqKey="Ndiade Bourobou D" first="Dyana" last="Ndiade-Bourobou">Dyana Ndiade-Bourobou</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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|texte= Comparative phylogeography of African rain forest trees: A review of genetic signatures of vegetation history in the Guineo-Congolian region
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